EEG Notebooks

Getting Started

  • Installation
    • Installing the Python library
    • MUSE Requirements
      • MUSE recordings on windows: BlueMuse
      • MUSE recordings on Mac: BLED112 Dongle
      • MUSE recordings on Linux
    • Issues
      • Common Problems
      • Bug reports
  • Initiating an EEG Stream
    • Supported Devices
      • Interaxon Muse
        • Using the Muse on Windows
      • OpenBCI Ganglion
      • OpenBCI Cyton
      • OpenBCI Cyton + Daisy
      • Neurosity Notion (versions 1 and 2)
      • Neurosity Crown
        • Connecting on Windows
      • BrainBit EEG Headband
      • G.Tec Unicorn
    • Initiating a Muse stream in Windows using Bluemuse
    • Finding the USB port of the OpenBCI USB dongle
  • Running Experiments
    • Command Line Interface
      • Using the introprompt flag
        • Board Selection
        • Experiment Selection
        • Recording Duration
        • Subject ID
        • Session Number
    • Using Jupyter Notebooks or a custom script
    • Using virtual reality
      • Heads up display
        • Features to be added in future releases:
      • Prerequisites:
      • Steps for running experiment in VR
      • Other experiments can have VR added too.
  • Data Zipping
    • Command Line Interface
    • Using the introprompt flag
  • Analyzing data
  • Available Experiments
    • Visual P300 with Oddball paradigm
    • N170
    • SSVEP
    • Old experiments
      • Go/No-Go
      • SSAEP
      • C1 and P1
      • Auditory P300
    • Unvalidated Experiments and other phenomena
      • N100 - P200
      • On-task Beta
      • Alpha reset

Experiments

  • Visual N170
    • N170 run experiment
      • Setup
      • Run experiment
    • N170 Load and Visualize Data
      • Setup
      • Load Data
      • Visualize the power spectrum
      • Filtering
      • Epoching
      • Epoch average
    • N170 Decoding
      • Setup
      • Load Data
      • Filteriing
      • Epoching
      • Run classification
      • Plot Decoding Results
  • Visual P300
    • P300 run experiment
      • Setup
      • Initiate EEG device
      • Run experiment
    • P300 Load and Visualize Data
      • Setup
      • Visualize the power spectrum
      • Filteriing
      • Epoching
      • Epoch average
    • P300 Decoding
      • Setup
      • Load Data
      • Filteriing
      • Epoching
      • Classfication
  • Visual SSVEP
    • SSVEP run experiment
      • Setup
      • Initiate EEG device
      • Run experiment
    • SSVEP Visualization
      • Visualize the power spectrum
      • Epoching
      • Stimuli-Specific PSD
      • Spectrogram
    • SSVEP Decoding
      • Setup
      • Load Data
      • Epoching
      • Decoding
      • Decoding
  • Visual Cueing
    • Cueing Single Subject Analysis
      • Setup
      • Load Data
      • Visualize the power spectrum
      • Power Spectral Density
      • Filtering
      • Epoching
      • Spectrogram
      • Now we compute and plot the differences
      • Target Epoching
    • Cueing Group Analysis
      • Setup
      • Download the data
      • Load data into MNE objects
      • Combine subjects
      • Compute t test
      • Save average powers ipsi and contra
      • Save spectra
    • Cueing Behavioural Analysis Winter 2019
      • Setup
      • Analyze .mat behavioural data for Accuracy and RT
    • Cueing Group Analysis Winter 2019
      • Setup
      • Load the data
      • Put the data into MNE Epochs
      • Combine subjects
      • Compute t test
      • Save average powers ipsi and contra
      • Save spectra
  • Visual Go-No-Go
  • All Notebook Examples
    • Cueing Single Subject Analysis
      • Setup
      • Load Data
      • Visualize the power spectrum
      • Power Spectral Density
      • Filtering
      • Epoching
      • Spectrogram
      • Now we compute and plot the differences
      • Target Epoching
    • Cueing Group Analysis
      • Setup
      • Download the data
      • Load data into MNE objects
      • Combine subjects
      • Compute t test
      • Save average powers ipsi and contra
      • Save spectra
    • Cueing Behavioural Analysis Winter 2019
      • Setup
      • Analyze .mat behavioural data for Accuracy and RT
    • Cueing Group Analysis Winter 2019
      • Setup
      • Load the data
      • Put the data into MNE Epochs
      • Combine subjects
      • Compute t test
      • Save average powers ipsi and contra
      • Save spectra
    • N170 run experiment
      • Setup
      • Run experiment
    • N170 Load and Visualize Data
      • Setup
      • Load Data
      • Visualize the power spectrum
      • Filtering
      • Epoching
      • Epoch average
    • N170 Decoding
      • Setup
      • Load Data
      • Filteriing
      • Epoching
      • Run classification
      • Plot Decoding Results
    • P300 run experiment
      • Setup
      • Initiate EEG device
      • Run experiment
    • P300 Load and Visualize Data
      • Setup
      • Visualize the power spectrum
      • Filteriing
      • Epoching
      • Epoch average
    • P300 Decoding
      • Setup
      • Load Data
      • Filteriing
      • Epoching
      • Classfication
    • SSVEP run experiment
      • Setup
      • Initiate EEG device
      • Run experiment
    • SSVEP Visualization
      • Visualize the power spectrum
      • Epoching
      • Stimuli-Specific PSD
      • Spectrogram
    • SSVEP Decoding
      • Setup
      • Load Data
      • Epoching
      • Decoding
      • Decoding

Misc

  • Technical Information about the MUSE
    • MUSE setup and usage
      • Introduction to the MUSE
      • Headband fit and signal quality tutorial
      • Adjusting and fitting the MUSE for better signal quality
      • Using water for better signal quality
    • Details related to Muse ERP analysis
  • About the EEG-ExPy Documentation Pages
  • NTCS Phase 1 Instructions
    • On this page
    • Instructional Videos
    • Summary of the steps
    • TL;DR instructions version
    • Full step-by-step instructions
      • 1. Sign up and provide informed consent.
      • 2. Check your e-mail.
      • 3. Install miniconda
      • 4. Set up environment and install eeg-expy
      • 5. Set up your EEG Device
        • 5.1 Windows+Muse device users
        • 5.2 OpenBCI Devices
      • 6. Run the visual N170 experiment
        • 6.1 Check your signal quality
        • 6.2 Run the experiment
      • 7. After recording, locate and zip your recorded data
        • 7.1 Take a look at what’s there
        • 7.2 Compress your data
      • 8. Upload your zipped data file to your personalized URL
      • 9. Make use of your newfangled knowledge!
    • FAQs, Troubleshooting, Gotchas
      • Where are my files?
      • OpenBCI Ports and drivers
      • Python is not 3.7
EEG Notebooks
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© Copyright John Griffiths, Jadin Tredup, NeuroTechX, & Contributors.

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